Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 BAK1P1-201ENST00000317045 636 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.29■□□□□ 0.04
MTHFRP42898 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.29■□□□□ 0.04
MTHFRP42898 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 ALG1L6P-201ENST00000515248 758 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 TMCO5B-205ENST00000530020 894 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.29■□□□□ 0.04
MTHFRP42898 RN7SL470P-201ENST00000583069 259 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.29■□□□□ 0.04
MTHFRP42898 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MTHFRP42898 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MTHFRP42898 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.29■□□□□ 0.04
MTHFRP42898 MARK2P16-201ENST00000605714 1723 ntBASIC15.29■□□□□ 0.04
MTHFRP42898 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
MTHFRP42898 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.28■□□□□ 0.04
MTHFRP42898 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 AC090502.4-201ENST00000551714 1386 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 AL009178.2-201ENST00000597278 2719 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC15.28■□□□□ 0.04
MTHFRP42898 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.28■□□□□ 0.04
MTHFRP42898 AL354861.1-201ENST00000445213 355 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 DUX4L50-201ENST00000455245 715 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 REEP5-205ENST00000504247 480 ntTSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 ALG1L13P-202ENST00000519320 584 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC15.28■□□□□ 0.04
MTHFRP42898 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
MTHFRP42898 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MTHFRP42898 FO393412.1-201ENST00000619841 382 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 AC138466.4-201ENST00000623965 852 ntBASIC15.28■□□□□ 0.04
MTHFRP42898 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
MTHFRP42898 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms