Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.25□□□□□ -0.29
APOBEC1P41238 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 AL354877.1-201ENST00000424412 413 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 Z93015.1-201ENST00000451718 390 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 AC100827.2-201ENST00000563214 1194 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 AC009955.4-201ENST00000597192 544 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 AC009884.2-201ENST00000603110 324 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 MIR6720-201ENST00000611664 98 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.25□□□□□ -0.29
APOBEC1P41238 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.25□□□□□ -0.29
APOBEC1P41238 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 HSPA7-201ENST00000445535 1927 ntBASIC13.25□□□□□ -0.29
APOBEC1P41238 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.25□□□□□ -0.29
APOBEC1P41238 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
APOBEC1P41238 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AC012441.2-201ENST00000444843 739 ntBASIC13.24□□□□□ -0.29
APOBEC1P41238 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBEC1P41238 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.24□□□□□ -0.29
APOBEC1P41238 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.24□□□□□ -0.29
APOBEC1P41238 RN7SL560P-201ENST00000577943 264 ntBASIC13.24□□□□□ -0.29
APOBEC1P41238 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
APOBEC1P41238 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
APOBEC1P41238 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
APOBEC1P41238 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBEC1P41238 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.23□□□□□ -0.29
APOBEC1P41238 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.23□□□□□ -0.29
APOBEC1P41238 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBEC1P41238 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBEC1P41238 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
APOBEC1P41238 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms