Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
MDH1P40925 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.73□□□□□ -0.05
MDH1P40925 AC007967.2-201ENST00000432613 625 ntBASIC14.73□□□□□ -0.05
MDH1P40925 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.73□□□□□ -0.05
MDH1P40925 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.73□□□□□ -0.05
MDH1P40925 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
MDH1P40925 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.73□□□□□ -0.05
MDH1P40925 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
MDH1P40925 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MDH1P40925 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MDH1P40925 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.72□□□□□ -0.05
MDH1P40925 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MDH1P40925 AL353779.1-201ENST00000434793 351 ntBASIC14.72□□□□□ -0.05
MDH1P40925 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.72□□□□□ -0.05
MDH1P40925 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 AL079307.3-201ENST00000556114 283 ntBASIC14.72□□□□□ -0.05
MDH1P40925 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.72□□□□□ -0.05
MDH1P40925 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 AC004623.1-201ENST00000624592 2127 ntBASIC14.72□□□□□ -0.05
MDH1P40925 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.72□□□□□ -0.05
MDH1P40925 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 AL035456.1-201ENST00000456064 1369 ntBASIC14.72□□□□□ -0.05
MDH1P40925 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC14.72□□□□□ -0.05
MDH1P40925 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MDH1P40925 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 AC015819.3-201ENST00000624305 2674 ntBASIC14.71□□□□□ -0.05
MDH1P40925 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MDH1P40925 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.71□□□□□ -0.05
MDH1P40925 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.71□□□□□ -0.05
MDH1P40925 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms