Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.03□□□□□ -0.48
CEACAM3P40198 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 AL390755.1-201ENST00000623716 2027 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.03□□□□□ -0.48
CEACAM3P40198 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.03□□□□□ -0.48
CEACAM3P40198 AC106881.1-201ENST00000605849 3329 ntBASIC12.03□□□□□ -0.48
CEACAM3P40198 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CEACAM3P40198 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.02□□□□□ -0.48
CEACAM3P40198 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CEACAM3P40198 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CEACAM3P40198 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.02□□□□□ -0.48
CEACAM3P40198 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 AC007292.2-201ENST00000593524 1812 ntBASIC12.02□□□□□ -0.48
CEACAM3P40198 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
CEACAM3P40198 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.02□□□□□ -0.48
CEACAM3P40198 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CEACAM3P40198 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CEACAM3P40198 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.02□□□□□ -0.49
CEACAM3P40198 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.02□□□□□ -0.49
CEACAM3P40198 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.02□□□□□ -0.49
CEACAM3P40198 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.02□□□□□ -0.49
CEACAM3P40198 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.02□□□□□ -0.49
CEACAM3P40198 C2orf69P2-201ENST00000562032 1123 ntBASIC12.02□□□□□ -0.49
CEACAM3P40198 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AL136301.1-201ENST00000615830 422 ntBASIC12.02□□□□□ -0.49
CEACAM3P40198 AC244157.2-201ENST00000616239 1006 ntBASIC12.02□□□□□ -0.49
CEACAM3P40198 WNT11-204ENST00000621122 789 ntTSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 CICP20-201ENST00000443330 2801 ntBASIC12.02□□□□□ -0.49
CEACAM3P40198 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AC026748.1-201ENST00000624349 3251 ntBASIC12.02□□□□□ -0.49
CEACAM3P40198 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CEACAM3P40198 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CEACAM3P40198 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.02□□□□□ -0.49
CEACAM3P40198 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CEACAM3P40198 STRCP1-201ENST00000509801 5328 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.01□□□□□ -0.49
CEACAM3P40198 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.01□□□□□ -0.49
CEACAM3P40198 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.01□□□□□ -0.49
CEACAM3P40198 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CEACAM3P40198 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms