Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC18.26■□□□□ 0.51
COL15A1P39059 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COL15A1P39059 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC18.26■□□□□ 0.51
COL15A1P39059 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.26■□□□□ 0.51
COL15A1P39059 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.26■□□□□ 0.51
COL15A1P39059 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.26■□□□□ 0.51
COL15A1P39059 AC021016.3-201ENST00000608367 477 ntBASIC18.26■□□□□ 0.51
COL15A1P39059 AC007250.1-201ENST00000608934 338 ntBASIC18.26■□□□□ 0.51
COL15A1P39059 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
COL15A1P39059 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.26■□□□□ 0.51
COL15A1P39059 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.26■□□□□ 0.51
COL15A1P39059 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL15A1P39059 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
COL15A1P39059 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.25■□□□□ 0.51
COL15A1P39059 MTHFR-210ENST00000641407 2387 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
COL15A1P39059 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 LAP3P2-201ENST00000454686 1454 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL15A1P39059 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 AC234644.1-201ENST00000406065 370 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 AC018638.5-201ENST00000450885 754 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC18.25■□□□□ 0.51
COL15A1P39059 AC093909.3-201ENST00000504783 336 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC18.25■□□□□ 0.51
COL15A1P39059 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 AC140658.4-201ENST00000561990 352 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 AC073592.2-201ENST00000623062 780 ntBASIC18.25■□□□□ 0.51
COL15A1P39059 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
COL15A1P39059 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL15A1P39059 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC18.25■□□□□ 0.51
COL15A1P39059 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL15A1P39059 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.24■□□□□ 0.51
COL15A1P39059 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.24■□□□□ 0.51
COL15A1P39059 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
COL15A1P39059 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 CSNK1G2P1-201ENST00000442675 955 ntBASIC18.24■□□□□ 0.51
COL15A1P39059 AC098934.1-203ENST00000442868 1262 ntBASIC18.24■□□□□ 0.51
COL15A1P39059 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.24■□□□□ 0.51
COL15A1P39059 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC18.24■□□□□ 0.51
COL15A1P39059 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL15A1P39059 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC18.24■□□□□ 0.51
COL15A1P39059 AC022447.6-201ENST00000515522 438 ntBASIC18.24■□□□□ 0.51
COL15A1P39059 SORD2P-201ENST00000558556 1069 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms