Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 NQO2-204ENST00000380454 851 ntTSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 EEF1DP5-201ENST00000431410 772 ntBASIC14.75□□□□□ -0.05
LTBRP36941 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.75□□□□□ -0.05
LTBRP36941 AC093300.1-201ENST00000510368 1201 ntBASIC14.75□□□□□ -0.05
LTBRP36941 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC14.75□□□□□ -0.05
LTBRP36941 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC14.75□□□□□ -0.05
LTBRP36941 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.75□□□□□ -0.05
LTBRP36941 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.75□□□□□ -0.05
LTBRP36941 AC120498.7-201ENST00000562876 330 ntBASIC14.75□□□□□ -0.05
LTBRP36941 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 KRT8P43-201ENST00000406052 1458 ntBASIC14.75□□□□□ -0.05
LTBRP36941 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LTBRP36941 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LTBRP36941 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LTBRP36941 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 HYMAI-201ENST00000635591 3347 ntBASIC14.74□□□□□ -0.05
LTBRP36941 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LTBRP36941 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LTBRP36941 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 SNORA57-201ENST00000383870 149 ntBASIC14.74□□□□□ -0.05
LTBRP36941 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
LTBRP36941 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.74□□□□□ -0.05
LTBRP36941 AC136604.1-202ENST00000425471 771 ntBASIC14.74□□□□□ -0.05
LTBRP36941 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.74□□□□□ -0.05
LTBRP36941 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.74□□□□□ -0.05
LTBRP36941 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.74□□□□□ -0.05
LTBRP36941 ALG1L7P-201ENST00000502317 768 ntBASIC14.74□□□□□ -0.05
LTBRP36941 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 SORD2P-201ENST00000558556 1069 ntBASIC14.74□□□□□ -0.05
LTBRP36941 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC14.74□□□□□ -0.05
LTBRP36941 AC091304.3-201ENST00000566500 716 ntBASIC14.74□□□□□ -0.05
LTBRP36941 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.74□□□□□ -0.05
LTBRP36941 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.74□□□□□ -0.05
LTBRP36941 NEK4P3-201ENST00000604859 544 ntBASIC14.74□□□□□ -0.05
LTBRP36941 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 PKD1P1-201ENST00000458669 6805 ntBASIC14.74□□□□□ -0.05
LTBRP36941 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
LTBRP36941 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LTBRP36941 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.73□□□□□ -0.05
LTBRP36941 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.73□□□□□ -0.05
LTBRP36941 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 SIRPB3P-201ENST00000340424 1216 ntBASIC14.73□□□□□ -0.05
LTBRP36941 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LTBRP36941 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC14.73□□□□□ -0.05
LTBRP36941 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms