Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDE6BP35913 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 PPP1R2P4-201ENST00000424051 595 ntBASIC17.81■□□□□ 0.44
PDE6BP35913 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 AC095040.1-201ENST00000513286 675 ntBASIC17.81■□□□□ 0.44
PDE6BP35913 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.81■□□□□ 0.44
PDE6BP35913 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.81■□□□□ 0.44
PDE6BP35913 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.81■□□□□ 0.44
PDE6BP35913 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC17.81■□□□□ 0.44
PDE6BP35913 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDE6BP35913 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.81■□□□□ 0.44
PDE6BP35913 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDE6BP35913 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.81■□□□□ 0.44
PDE6BP35913 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDE6BP35913 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDE6BP35913 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
PDE6BP35913 MIR1301-201ENST00000408518 82 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.8■□□□□ 0.44
PDE6BP35913 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC17.8■□□□□ 0.44
PDE6BP35913 AC008026.2-201ENST00000495438 348 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
PDE6BP35913 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 GOLGA2P7-209ENST00000560408 745 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 AC145285.5-201ENST00000562217 361 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 SNORD3B-1-201ENST00000577988 758 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 AL021707.6-201ENST00000609212 491 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 ACE3P-201ENST00000423435 1973 ntBASIC17.8■□□□□ 0.44
PDE6BP35913 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDE6BP35913 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.8■□□□□ 0.44
PDE6BP35913 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PDE6BP35913 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC17.79■□□□□ 0.44
PDE6BP35913 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.79■□□□□ 0.44
PDE6BP35913 MIR566-201ENST00000385187 94 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.79■□□□□ 0.44
PDE6BP35913 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 GRPEL2P1-201ENST00000453145 339 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 AC063952.3-201ENST00000467756 308 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 TREHP1-201ENST00000531328 465 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDE6BP35913 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.79■□□□□ 0.44
PDE6BP35913 KRT8P2-201ENST00000556193 944 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.79■□□□□ 0.44
PDE6BP35913 USB1-205ENST00000561743 1135 ntTSL 3 BASIC17.79■□□□□ 0.44
PDE6BP35913 AC005586.2-201ENST00000563946 837 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.79■□□□□ 0.44
PDE6BP35913 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.79■□□□□ 0.44
PDE6BP35913 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.79■□□□□ 0.44
PDE6BP35913 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 FUCA1P1-201ENST00000374476 1351 ntBASIC17.79■□□□□ 0.44
PDE6BP35913 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDE6BP35913 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDE6BP35913 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms