Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.65■□□□□ 0.26
CNGA1P29973 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 AC012362.1-201ENST00000434906 739 ntBASIC16.65■□□□□ 0.26
CNGA1P29973 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.65■□□□□ 0.26
CNGA1P29973 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.65■□□□□ 0.26
CNGA1P29973 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC16.65■□□□□ 0.26
CNGA1P29973 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 KRT18P9-201ENST00000604826 1300 ntBASIC16.65■□□□□ 0.26
CNGA1P29973 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.65■□□□□ 0.26
CNGA1P29973 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.65■□□□□ 0.26
CNGA1P29973 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CNGA1P29973 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CNGA1P29973 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CNGA1P29973 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CNGA1P29973 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 AC097065.1-201ENST00000425737 517 ntBASIC16.64■□□□□ 0.25
CNGA1P29973 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.64■□□□□ 0.25
CNGA1P29973 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 PIN4P1-201ENST00000451079 396 ntBASIC16.64■□□□□ 0.25
CNGA1P29973 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.64■□□□□ 0.25
CNGA1P29973 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.64■□□□□ 0.25
CNGA1P29973 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 AC087392.5-201ENST00000612517 489 ntBASIC16.64■□□□□ 0.25
CNGA1P29973 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.64■□□□□ 0.25
CNGA1P29973 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNGA1P29973 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNGA1P29973 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.63■□□□□ 0.25
CNGA1P29973 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.63■□□□□ 0.25
CNGA1P29973 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNGA1P29973 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNGA1P29973 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNGA1P29973 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNGA1P29973 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CNGA1P29973 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNGA1P29973 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CNGA1P29973 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNGA1P29973 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL627422.1-201ENST00000434104 580 ntBASIC16.63■□□□□ 0.25
CNGA1P29973 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.63■□□□□ 0.25
CNGA1P29973 AL035414.1-201ENST00000451327 857 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms