Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC018735.1-201ENST00000437208 1502 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ABCD3P28288 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AL645933.1-201ENST00000440087 609 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.51□□□□□ -0.25
ABCD3P28288 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 MIR4538-201ENST00000581377 78 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
ABCD3P28288 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCD3P28288 AL008638.5-201ENST00000623814 1298 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 Z98259.2-201ENST00000641583 609 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC079781.5-202ENST00000641784 3743 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCD3P28288 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCD3P28288 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 AC005912.2-201ENST00000619492 2400 ntBASIC13.51□□□□□ -0.25
ABCD3P28288 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCD3P28288 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
ABCD3P28288 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCD3P28288 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 AC015802.1-201ENST00000588104 1449 ntBASIC13.5□□□□□ -0.25
ABCD3P28288 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ABCD3P28288 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCD3P28288 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCD3P28288 RNMTL1P1-201ENST00000454103 560 ntBASIC13.5□□□□□ -0.25
ABCD3P28288 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCD3P28288 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.5□□□□□ -0.25
ABCD3P28288 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ABCD3P28288 AC027237.1-201ENST00000560942 655 ntBASIC13.5□□□□□ -0.25
ABCD3P28288 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCD3P28288 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 AL118558.3-201ENST00000607414 1079 ntBASIC13.5□□□□□ -0.25
ABCD3P28288 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ABCD3P28288 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCD3P28288 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
ABCD3P28288 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCD3P28288 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCD3P28288 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ABCD3P28288 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms