Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 AL450487.1-201ENST00000426799 995 ntBASIC12.31□□□□□ -0.44
CXCL3P19876 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 RNA5SP415-201ENST00000517246 115 ntBASIC12.31□□□□□ -0.44
CXCL3P19876 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
CXCL3P19876 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.31□□□□□ -0.44
CXCL3P19876 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.31□□□□□ -0.44
CXCL3P19876 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.31□□□□□ -0.44
CXCL3P19876 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CXCL3P19876 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 AC007064.4-201ENST00000637740 555 ntBASIC12.31□□□□□ -0.44
CXCL3P19876 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CXCL3P19876 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.31□□□□□ -0.44
CXCL3P19876 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CXCL3P19876 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.3□□□□□ -0.44
CXCL3P19876 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC12.3□□□□□ -0.44
CXCL3P19876 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.3□□□□□ -0.44
CXCL3P19876 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.3□□□□□ -0.44
CXCL3P19876 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.3□□□□□ -0.44
CXCL3P19876 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.3□□□□□ -0.44
CXCL3P19876 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.3□□□□□ -0.44
CXCL3P19876 AP001005.1-201ENST00000571755 1248 ntBASIC12.3□□□□□ -0.44
CXCL3P19876 AC092364.2-202ENST00000597012 1073 ntBASIC12.3□□□□□ -0.44
CXCL3P19876 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.3□□□□□ -0.44
CXCL3P19876 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.3□□□□□ -0.44
CXCL3P19876 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.3□□□□□ -0.44
CXCL3P19876 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CXCL3P19876 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.3□□□□□ -0.44
CXCL3P19876 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CXCL3P19876 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL3P19876 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL3P19876 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL3P19876 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.29□□□□□ -0.44
CXCL3P19876 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CXCL3P19876 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms