Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.8□□□□□ -0.04
THRAP10827 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.8□□□□□ -0.04
THRAP10827 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.8□□□□□ -0.04
THRAP10827 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 AL122018.1-201ENST00000446607 2310 ntBASIC14.8□□□□□ -0.04
THRAP10827 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
THRAP10827 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.79□□□□□ -0.04
THRAP10827 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.79□□□□□ -0.04
THRAP10827 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
THRAP10827 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
THRAP10827 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 RNU1-114P-201ENST00000365297 166 ntBASIC14.79□□□□□ -0.04
THRAP10827 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
THRAP10827 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 ACTBP8-201ENST00000403258 1108 ntBASIC14.79□□□□□ -0.04
THRAP10827 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
THRAP10827 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.79□□□□□ -0.04
THRAP10827 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 RPL13AP20-201ENST00000459725 609 ntBASIC14.79□□□□□ -0.04
THRAP10827 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.79□□□□□ -0.04
THRAP10827 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 AC108725.1-201ENST00000495472 409 ntBASIC14.79□□□□□ -0.04
THRAP10827 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.79□□□□□ -0.04
THRAP10827 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 AC078819.1-201ENST00000547454 765 ntBASIC14.79□□□□□ -0.04
THRAP10827 AC012085.1-201ENST00000548270 765 ntBASIC14.79□□□□□ -0.04
THRAP10827 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC14.79□□□□□ -0.04
THRAP10827 RN7SL560P-201ENST00000577943 264 ntBASIC14.79□□□□□ -0.04
THRAP10827 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 MIR6787-201ENST00000616675 61 ntBASIC14.79□□□□□ -0.04
THRAP10827 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
THRAP10827 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
THRAP10827 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THRAP10827 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
THRAP10827 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
THRAP10827 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
THRAP10827 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.78□□□□□ -0.04
THRAP10827 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.78□□□□□ -0.04
THRAP10827 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
THRAP10827 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THRAP10827 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.78□□□□□ -0.04
THRAP10827 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms