Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC14.27□□□□□ -0.13
LINGO3P0C6S8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AC015910.1-201ENST00000579400 975 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SRD5A3P1-201ENST00000603021 949 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 PCDHB17P-202ENST00000623466 3066 ntBASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LINGO3P0C6S8 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AC012531.1-201ENST00000562848 2680 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 HMGN1P19-201ENST00000436976 333 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AC104794.3-201ENST00000566840 1248 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 AC004790.1-201ENST00000612686 536 ntBASIC14.25□□□□□ -0.13
LINGO3P0C6S8 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.25□□□□□ -0.13
LINGO3P0C6S8 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms