Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RAB40ALP0C0E4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 PDIA3P2-201ENST00000428073 158 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 FTLP1-201ENST00000449155 526 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AC234782.1-201ENST00000451950 919 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 RBM8B-201ENST00000555532 525 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AC103988.2-201ENST00000561804 725 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AF254983.2-201ENST00000612331 135 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AC136759.1-202ENST00000530858 2194 ntBASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RAB40ALP0C0E4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 EEF1DP6-201ENST00000449232 372 ntBASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RAB40ALP0C0E4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms