Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 BNIP3P41-202ENST00000616656 861 ntBASIC13.53□□□□□ -0.24
THBS1P07996 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.53□□□□□ -0.24
THBS1P07996 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
THBS1P07996 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
THBS1P07996 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
THBS1P07996 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.53□□□□□ -0.24
THBS1P07996 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
THBS1P07996 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.52□□□□□ -0.24
THBS1P07996 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
THBS1P07996 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.52□□□□□ -0.24
THBS1P07996 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
THBS1P07996 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
THBS1P07996 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
THBS1P07996 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 AL136309.1-201ENST00000403917 691 ntBASIC13.52□□□□□ -0.25
THBS1P07996 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 TMEM14DP-201ENST00000422205 345 ntBASIC13.52□□□□□ -0.25
THBS1P07996 FAM197Y7-201ENST00000432892 766 ntBASIC13.52□□□□□ -0.25
THBS1P07996 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
THBS1P07996 FTH1P14-201ENST00000482930 551 ntBASIC13.52□□□□□ -0.25
THBS1P07996 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS1P07996 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS1P07996 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 RN7SL713P-201ENST00000582127 302 ntBASIC13.52□□□□□ -0.25
THBS1P07996 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.52□□□□□ -0.25
THBS1P07996 BTNL10-201ENST00000595971 695 ntBASIC13.52□□□□□ -0.25
THBS1P07996 AP000240.1-201ENST00000609910 452 ntBASIC13.52□□□□□ -0.25
THBS1P07996 MIR6799-201ENST00000620297 69 ntBASIC13.52□□□□□ -0.25
THBS1P07996 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
THBS1P07996 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
THBS1P07996 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.52□□□□□ -0.25
THBS1P07996 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 CICP4-201ENST00000447359 2812 ntBASIC13.51□□□□□ -0.25
THBS1P07996 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
THBS1P07996 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
THBS1P07996 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.51□□□□□ -0.25
THBS1P07996 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms