Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
HMGN1P05114 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.35□□□□□ -0.27
HMGN1P05114 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HMGN1P05114 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HMGN1P05114 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HMGN1P05114 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.34□□□□□ -0.27
HMGN1P05114 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 AC023794.5-201ENST00000564380 2157 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
HMGN1P05114 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 POM121L4P-202ENST00000427789 1891 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 TCAF1P1-201ENST00000414990 2232 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC004945.1-201ENST00000416738 983 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.34□□□□□ -0.27
HMGN1P05114 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC103988.2-201ENST00000561804 725 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC138761.1-201ENST00000584393 385 ntBASIC13.34□□□□□ -0.27
HMGN1P05114 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
HMGN1P05114 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HMGN1P05114 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HMGN1P05114 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HMGN1P05114 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.33□□□□□ -0.27
HMGN1P05114 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
HMGN1P05114 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
HMGN1P05114 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGN1P05114 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGN1P05114 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
HMGN1P05114 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HMGN1P05114 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HMGN1P05114 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGN1P05114 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
HMGN1P05114 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 SOCS2P1-201ENST00000417727 557 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.33□□□□□ -0.28
HMGN1P05114 AL442647.2-201ENST00000429864 857 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.33□□□□□ -0.28
HMGN1P05114 AL512638.1-201ENST00000457493 794 ntBASIC13.33□□□□□ -0.28
HMGN1P05114 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms