Protein–RNA interactions for Protein: P02730

SLC4A1, Band 3 anion transport protein, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A1P02730 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC4A1P02730 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 KRT223P-202ENST00000449164 1292 ntBASIC14.95□□□□□ -0.02
SLC4A1P02730 MESTP3-201ENST00000503460 968 ntBASIC14.95□□□□□ -0.02
SLC4A1P02730 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC4A1P02730 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC4A1P02730 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC4A1P02730 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AP003171.2-201ENST00000528208 925 ntBASIC14.95□□□□□ -0.02
SLC4A1P02730 MIR4683-201ENST00000579659 81 ntBASIC14.95□□□□□ -0.02
SLC4A1P02730 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC4A1P02730 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC4A1P02730 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC4A1P02730 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 MIR6805-201ENST00000615055 62 ntBASIC14.95□□□□□ -0.02
SLC4A1P02730 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC4A1P02730 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC4A1P02730 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC4A1P02730 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC4A1P02730 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 AC126335.2-201ENST00000623362 4637 ntBASIC14.94□□□□□ -0.02
SLC4A1P02730 AL138725.1-201ENST00000407347 1314 ntBASIC14.94□□□□□ -0.02
SLC4A1P02730 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC4A1P02730 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.94□□□□□ -0.02
SLC4A1P02730 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
SLC4A1P02730 HLA-V-201ENST00000429037 534 ntBASIC14.94□□□□□ -0.02
SLC4A1P02730 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC4A1P02730 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC4A1P02730 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.94□□□□□ -0.02
SLC4A1P02730 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SLC4A1P02730 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC4A1P02730 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC4A1P02730 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SLC4A1P02730 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC4A1P02730 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC4A1P02730 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC4A1P02730 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.93□□□□□ -0.02
SLC4A1P02730 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC4A1P02730 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SLC4A1P02730 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SLC4A1P02730 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.93□□□□□ -0.02
SLC4A1P02730 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms