Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 PIN1P1-201ENST00000412108 996 ntBASIC13.07□□□□□ -0.32
APOC1P02654 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.07□□□□□ -0.32
APOC1P02654 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.07□□□□□ -0.32
APOC1P02654 AC026434.2-201ENST00000506094 1078 ntBASIC13.07□□□□□ -0.32
APOC1P02654 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
APOC1P02654 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 CU634019.7-201ENST00000624153 1185 ntBASIC13.07□□□□□ -0.32
APOC1P02654 FP236241.2-201ENST00000624906 1185 ntBASIC13.07□□□□□ -0.32
APOC1P02654 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.07□□□□□ -0.32
APOC1P02654 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.07□□□□□ -0.32
APOC1P02654 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
APOC1P02654 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC1P02654 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC1P02654 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.06□□□□□ -0.32
APOC1P02654 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 AC022137.2-201ENST00000503482 481 ntBASIC13.06□□□□□ -0.32
APOC1P02654 AC140912.1-201ENST00000577171 1054 ntBASIC13.06□□□□□ -0.32
APOC1P02654 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
APOC1P02654 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.06□□□□□ -0.32
APOC1P02654 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.06□□□□□ -0.32
APOC1P02654 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
APOC1P02654 AC092135.3-201ENST00000624151 1846 ntBASIC13.06□□□□□ -0.32
APOC1P02654 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
APOC1P02654 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.06□□□□□ -0.32
APOC1P02654 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
APOC1P02654 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC1P02654 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
APOC1P02654 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC1P02654 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC1P02654 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms