Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AC010327.5-201ENST00000586923 3061 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 KRT8P35-201ENST00000483942 1338 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TLE1P1-201ENST00000422965 589 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 EIF3FP3-201ENST00000434851 1086 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AL162726.2-201ENST00000438986 1017 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 CHCHD2P3-201ENST00000603038 451 ntBASIC13.25□□□□□ -0.29
HLA-DQA2P01906 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HLA-DQA2P01906 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AC041040.2-201ENST00000622926 2899 ntBASIC13.24□□□□□ -0.29
HLA-DQA2P01906 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 ACTBP8-201ENST00000403258 1108 ntBASIC13.24□□□□□ -0.29
HLA-DQA2P01906 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 FO681548.1-201ENST00000455617 1132 ntBASIC13.24□□□□□ -0.29
HLA-DQA2P01906 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AP001063.1-201ENST00000568332 529 ntBASIC13.24□□□□□ -0.29
HLA-DQA2P01906 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.24□□□□□ -0.29
HLA-DQA2P01906 AC005252.2-201ENST00000624630 1141 ntBASIC13.24□□□□□ -0.29
HLA-DQA2P01906 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms