Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM3O75382 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM3O75382 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.77□□□□□ -0.21
TRIM3O75382 AC004466.1-201ENST00000599515 1080 ntBASIC13.77□□□□□ -0.21
TRIM3O75382 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM3O75382 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.77□□□□□ -0.21
TRIM3O75382 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 AC027601.5-201ENST00000624065 2482 ntBASIC13.77□□□□□ -0.21
TRIM3O75382 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.77□□□□□ -0.21
TRIM3O75382 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.77□□□□□ -0.21
TRIM3O75382 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TRIM3O75382 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TRIM3O75382 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM3O75382 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.76□□□□□ -0.21
TRIM3O75382 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TRIM3O75382 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM3O75382 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM3O75382 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM3O75382 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.76□□□□□ -0.21
TRIM3O75382 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.76□□□□□ -0.21
TRIM3O75382 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
TRIM3O75382 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.76□□□□□ -0.21
TRIM3O75382 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 AC027612.1-201ENST00000445234 2395 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 AL354989.2-201ENST00000435838 1540 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
TRIM3O75382 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 TUBB1P2-201ENST00000422712 1306 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 CLUHP2-201ENST00000426660 1303 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM3O75382 TUBB1P1-201ENST00000503144 1300 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.75□□□□□ -0.21
TRIM3O75382 FAM8A4P-201ENST00000435433 1213 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.75□□□□□ -0.21
TRIM3O75382 MESTP3-201ENST00000503460 968 ntBASIC13.75□□□□□ -0.21
TRIM3O75382 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.75□□□□□ -0.21
TRIM3O75382 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM3O75382 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
TRIM3O75382 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.75□□□□□ -0.21
TRIM3O75382 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.75□□□□□ -0.21
TRIM3O75382 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRIM3O75382 AC138466.3-201ENST00000619983 221 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms