Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 E2F3P2-201ENST00000447755 1422 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC117489.1-201ENST00000625169 3217 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 MIR658-201ENST00000385210 100 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC079178.1-201ENST00000420915 656 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 YBX1P6-201ENST00000442962 1002 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC100850.1-201ENST00000506768 649 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 EEF1DP1-201ENST00000585891 896 ntBASIC13.06□□□□□ -0.32
TRAF3IP2O43734 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAF3IP2O43734 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 AC020910.6-201ENST00000623084 1459 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DUX4L46-201ENST00000566845 751 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MIR4741-201ENST00000579822 90 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MIR4783-201ENST00000580343 82 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 AC009955.4-201ENST00000597192 544 ntBASIC13.05□□□□□ -0.32
TRAF3IP2O43734 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAF3IP2O43734 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms