Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK1AO00322 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK1AO00322 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK1AO00322 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.9□□□□□ -0.18
UPK1AO00322 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 AC083964.2-201ENST00000623988 2396 ntBASIC13.9□□□□□ -0.18
UPK1AO00322 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.9□□□□□ -0.18
UPK1AO00322 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
UPK1AO00322 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
UPK1AO00322 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
UPK1AO00322 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
UPK1AO00322 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
UPK1AO00322 AP000593.2-201ENST00000542775 1433 ntBASIC13.9□□□□□ -0.19
UPK1AO00322 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 AC114271.1-201ENST00000612689 2813 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 FAM197Y7-201ENST00000432892 766 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 AC005225.4-201ENST00000557330 545 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 AC106820.3-201ENST00000561653 397 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 LINC02084-201ENST00000606069 1096 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 AC244669.2-201ENST00000612320 853 ntBASIC13.89□□□□□ -0.19
UPK1AO00322 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
UPK1AO00322 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
UPK1AO00322 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.89□□□□□ -0.19
UPK1AO00322 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
UPK1AO00322 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1AO00322 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
UPK1AO00322 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UPK1AO00322 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1AO00322 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
UPK1AO00322 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.88□□□□□ -0.19
UPK1AO00322 AC009093.2-202ENST00000620513 2079 ntBASIC13.88□□□□□ -0.19
UPK1AO00322 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.88□□□□□ -0.19
UPK1AO00322 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UPK1AO00322 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
UPK1AO00322 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.88□□□□□ -0.19
UPK1AO00322 KRT17P7-201ENST00000451704 1104 ntBASIC13.88□□□□□ -0.19
UPK1AO00322 AC007551.1-201ENST00000457394 519 ntBASIC13.88□□□□□ -0.19
UPK1AO00322 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
UPK1AO00322 CR383656.12-201ENST00000549567 513 ntBASIC13.88□□□□□ -0.19
UPK1AO00322 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms