Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 TUBB3P1-201ENST00000405796 1332 ntBASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGB1P1B2RPK0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CARS-214ENST00000529772 2637 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AL662844.1-201ENST00000546340 181 ntBASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AL031719.1-201ENST00000623365 2587 ntBASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.9□□□□□ -0.02
HMGB1P1B2RPK0 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AL359845.1-201ENST00000458202 1648 ntBASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AL080243.2-201ENST00000418783 582 ntBASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AL691432.3-201ENST00000621860 400 ntBASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AC004461.2-201ENST00000629517 803 ntBASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 AC003102.2-201ENST00000589195 1469 ntBASIC14.89□□□□□ -0.03
HMGB1P1B2RPK0 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms