Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC78A2IDD5 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 MRPL37P1-201ENST00000592451 1337 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC092933.1-201ENST00000393644 945 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 TLE1P1-201ENST00000422965 589 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 MESTP3-201ENST00000503460 968 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC131206.1-201ENST00000538078 1211 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC233724.13-201ENST00000598383 410 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 OR10B1P-201ENST00000601666 907 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC010327.5-201ENST00000586923 3061 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 AC011498.7-201ENST00000624986 2027 ntBASIC14.92□□□□□ -0.02
CCDC78A2IDD5 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCDC78A2IDD5 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 AC005229.1-201ENST00000392885 409 ntBASIC14.91□□□□□ -0.02
CCDC78A2IDD5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 C2orf27AP3-201ENST00000434123 579 ntBASIC14.91□□□□□ -0.02
CCDC78A2IDD5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 CROCCP4-201ENST00000457096 498 ntBASIC14.91□□□□□ -0.02
CCDC78A2IDD5 FTLP10-202ENST00000505798 471 ntBASIC14.91□□□□□ -0.02
CCDC78A2IDD5 GCOM2-201ENST00000509133 1104 ntBASIC14.91□□□□□ -0.02
CCDC78A2IDD5 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC78A2IDD5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms