Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC106794.1-201ENST00000506935 792 ntBASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 MARK2P5-201ENST00000507649 634 ntBASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC013355.1-201ENST00000562625 723 ntBASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL136295.7-201ENST00000619226 1200 ntBASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC092299.1-201ENST00000632679 757 ntBASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.31□□□□□ -0.12
TRBV5-4A0A0C4DH59 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AC044849.1-201ENST00000519737 1188 ntBASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRBV5-4A0A0C4DH59 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRBV5-4A0A0C4DH59 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.29□□□□□ -0.12
TRBV5-4A0A0C4DH59 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms