Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 MIR4746-201ENST00000579802 71 ntBASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 PRMT1P1-201ENST00000604252 1009 ntBASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CDC42BPBQ9Y5S2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 MYB-242ENST00000618728 3545 ntTSL 5 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 PAUPAR-201ENST00000630360 2965 ntBASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AC004522.1-201ENST00000419978 654 ntBASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 GULOP-201ENST00000454030 748 ntBASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AC073869.4-201ENST00000620841 800 ntBASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CDC42BPBQ9Y5S2 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 KRT18P15-201ENST00000458108 1291 ntBASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 HNRNPA1P5-201ENST00000558213 966 ntBASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
CDC42BPBQ9Y5S2 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC21.33■■□□□ 1
CDC42BPBQ9Y5S2 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 CDCA4P4-201ENST00000435216 680 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 BCRP4-201ENST00000506079 804 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 AC018846.1-201ENST00000568231 183 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 CICP14-201ENST00000629111 2732 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 HMGA1P1-201ENST00000415560 1062 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 COQ10BP2-201ENST00000513804 724 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 PTPN20CP-201ENST00000614090 920 ntBASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC21.32■■□□□ 1
CDC42BPBQ9Y5S2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPBQ9Y5S2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPBQ9Y5S2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPBQ9Y5S2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDC42BPBQ9Y5S2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms