Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 RAN-210ENST00000541630 1475 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 FGD5P1-202ENST00000614866 2498 ntBASIC10.04□□□□□ -0.8
LINC00588Q9Y4M8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 KHSRPP1-201ENST00000427983 1768 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MX1-218ENST00000619682 1980 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ISCA2P1-201ENST00000425548 448 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 NUP210P1-202ENST00000504322 710 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 RHOQP1-201ENST00000555758 579 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CHMP4BP1-201ENST00000556017 588 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 AC106872.11-201ENST00000605838 421 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 KRT8P21-201ENST00000430398 1491 ntBASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
LINC00588Q9Y4M8 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
LINC00588Q9Y4M8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms