Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AC104982.3-201ENST00000581995 514 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AL008718.2-201ENST00000609206 1313 ntBASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.58□□□□□ -0.24
DTX4Q9Y2E6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 RNMTL1P1-201ENST00000454103 560 ntBASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC027237.1-201ENST00000560942 655 ntBASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC005962.1-201ENST00000584100 773 ntBASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC091271.1-201ENST00000611877 1162 ntBASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC152010.1-201ENST00000415779 2006 ntBASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.57□□□□□ -0.24
DTX4Q9Y2E6 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 AC010327.5-201ENST00000586923 3061 ntBASIC13.56□□□□□ -0.24
DTX4Q9Y2E6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms