Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 TCAM1P-207ENST00000485295 1537 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC105206.1-202ENST00000314927 2368 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AC015688.4-201ENST00000580780 1647 ntBASIC13.16□□□□□ -0.3
COPS3Q9UNS2 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
COPS3Q9UNS2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 MRPL37P1-201ENST00000592451 1337 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 TMEM198B-204ENST00000484016 896 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 GIMAP3P-201ENST00000495150 836 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 AC131206.1-201ENST00000538078 1211 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 HSPA8P5-201ENST00000456928 2069 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CES1P1-201ENST00000421606 1704 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 PPT1-213ENST00000641319 2388 ntBASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.15□□□□□ -0.3
COPS3Q9UNS2 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
COPS3Q9UNS2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
COPS3Q9UNS2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
COPS3Q9UNS2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
COPS3Q9UNS2 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms