Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
HMG20BQ9P0W2 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 KRT18P36-201ENST00000411618 1276 ntBASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AL596276.2-201ENST00000447525 331 ntBASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 RN7SL574P-201ENST00000581512 297 ntBASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HMG20BQ9P0W2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20BQ9P0W2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20BQ9P0W2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20BQ9P0W2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.77■□□□□ 0.43
HMG20BQ9P0W2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20BQ9P0W2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AF254983.2-201ENST00000612331 135 ntBASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 AL157813.1-201ENST00000612996 587 ntBASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20BQ9P0W2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC17.75■□□□□ 0.43
HMG20BQ9P0W2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms