Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
PARPBPQ9NWS1 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
PARPBPQ9NWS1 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
PARPBPQ9NWS1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
PARPBPQ9NWS1 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.21□□□□□ -0.29
PARPBPQ9NWS1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
PARPBPQ9NWS1 DMBT1P1-203ENST00000636837 4628 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC106881.1-201ENST00000605849 3329 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC244107.1-201ENST00000442033 332 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC119751.2-201ENST00000504529 210 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GCOM2-201ENST00000509133 1104 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 NCK2-206ENST00000522586 490 ntTSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC073413.1-201ENST00000603927 732 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 KRT8P4-201ENST00000509735 1454 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 AL136172.1-201ENST00000598590 1394 ntBASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
PARPBPQ9NWS1 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
PARPBPQ9NWS1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms