Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AL359711.2-201ENST00000563105 872 ntBASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 WFDC1-204ENST00000613603 549 ntBASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AL033527.5-201ENST00000641382 801 ntBASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 FP325330.2-201ENST00000624219 5630 ntBASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 CU639417.3-201ENST00000624240 1404 ntBASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.27□□□□□ -0.45
LIN7CQ9NUP9 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 KRT8P24-201ENST00000560290 1559 ntBASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 RN7SL752P-201ENST00000463779 287 ntBASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AL596325.1-201ENST00000563991 1082 ntBASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC105233.6-201ENST00000642093 218 ntBASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 KRT8P14-201ENST00000414254 1442 ntBASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LIN7CQ9NUP9 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms