Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 KRT8P31-201ENST00000504812 1408 ntBASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
KIAA1549Q9HCM3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 PRKXP1-201ENST00000561423 1122 ntBASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 MIR4722-201ENST00000578292 60 ntBASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 FRMPD2B-201ENST00000431305 1347 ntBASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.91□□□□□ -0.34
KIAA1549Q9HCM3 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC003686.1-201ENST00000550956 1034 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC242376.1-201ENST00000559033 726 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC005586.2-201ENST00000563946 837 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC021016.3-201ENST00000608367 477 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TSPY25P-201ENST00000429463 745 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC140658.4-201ENST00000561990 352 ntBASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
KIAA1549Q9HCM3 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms