Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL359219.1-201ENST00000556311 934 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 PSME3-213ENST00000592169 826 ntTSL 3 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC009093.10-201ENST00000641956 1442 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 Z84721.1-201ENST00000438841 372 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 GOLGA2P8-201ENST00000505201 779 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 RN7SL202P-201ENST00000584410 262 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AP005264.5-201ENST00000590066 467 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC138392.1-201ENST00000427577 921 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SRP9P1-201ENST00000445874 261 ntBASIC13.23□□□□□ -0.29
CHD8Q9HCK8 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC13.23□□□□□ -0.29
CHD8Q9HCK8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RPSAP6-201ENST00000417882 882 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 RFNG-202ENST00000429557 994 ntTSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 TBC1D3P6-201ENST00000505954 962 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 BX510359.7-201ENST00000619819 630 ntBASIC13.22□□□□□ -0.29
CHD8Q9HCK8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.22□□□□□ -0.29
CHD8Q9HCK8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms