Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.91□□□□□ -0.34
ELL3Q9HB65 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.91□□□□□ -0.34
ELL3Q9HB65 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.91□□□□□ -0.34
ELL3Q9HB65 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 AC023090.2-201ENST00000625182 2110 ntBASIC12.91□□□□□ -0.34
ELL3Q9HB65 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.91□□□□□ -0.34
ELL3Q9HB65 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ELL3Q9HB65 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AL928921.2-201ENST00000641325 2442 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 DRD5P1-201ENST00000456605 1438 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC015802.1-201ENST00000588104 1449 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 DFFBP1-201ENST00000433250 979 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 RN7SL399P-201ENST00000471648 279 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 RPL13AP25-201ENST00000484130 612 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC123567.1-201ENST00000548294 1261 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC138761.1-201ENST00000584393 385 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC008494.3-201ENST00000606615 944 ntBASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
ELL3Q9HB65 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.9□□□□□ -0.34
ELL3Q9HB65 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
ELL3Q9HB65 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ELL3Q9HB65 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
ELL3Q9HB65 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ELL3Q9HB65 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
ELL3Q9HB65 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 AC152010.1-201ENST00000415779 2006 ntBASIC12.89□□□□□ -0.35
ELL3Q9HB65 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
ELL3Q9HB65 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 HLA-K-203ENST00000430151 1046 ntBASIC12.89□□□□□ -0.35
ELL3Q9HB65 AL353779.1-201ENST00000434793 351 ntBASIC12.89□□□□□ -0.35
ELL3Q9HB65 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 TPT1P11-201ENST00000458482 498 ntBASIC12.89□□□□□ -0.35
ELL3Q9HB65 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.89□□□□□ -0.35
ELL3Q9HB65 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms