Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF2Q9HAU5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 BTBD7P1-201ENST00000447253 1453 ntBASIC18.07■□□□□ 0.48
UPF2Q9HAU5 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 AC015909.5-201ENST00000624336 2266 ntBASIC18.07■□□□□ 0.48
UPF2Q9HAU5 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 CNN2P11-201ENST00000429351 262 ntBASIC18.07■□□□□ 0.48
UPF2Q9HAU5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC18.07■□□□□ 0.48
UPF2Q9HAU5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 KLF2P3-201ENST00000451977 1087 ntBASIC18.06■□□□□ 0.48
UPF2Q9HAU5 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC112482.1-201ENST00000492080 688 ntBASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC026434.2-201ENST00000506094 1078 ntBASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UPF2Q9HAU5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms