Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 GRPEL2P1-201ENST00000453145 339 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 SNORD3B-1-201ENST00000577988 758 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC055811.3-201ENST00000584952 686 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AL672207.1-201ENST00000328462 1570 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 AC215219.1-201ENST00000400706 1817 ntBASIC18.66■□□□□ 0.58
PCDH11XQ9BZA7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 AC018529.2-202ENST00000611482 3087 ntBASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 AC019109.1-201ENST00000401725 1874 ntBASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 OR2A1-AS1-210ENST00000496968 531 ntBASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PCDH11XQ9BZA7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11XQ9BZA7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11XQ9BZA7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11XQ9BZA7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PCDH11XQ9BZA7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 AC022532.1-201ENST00000624563 1728 ntBASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 KRT17P4-201ENST00000429445 819 ntBASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 RN7SL494P-201ENST00000461517 304 ntBASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PCDH11XQ9BZA7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms