Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 AL138725.1-201ENST00000407347 1314 ntBASIC14.32□□□□□ -0.12
EBF4Q9BQW3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.32□□□□□ -0.12
EBF4Q9BQW3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 RN7SKP230-201ENST00000365642 335 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 CNN2P2-201ENST00000443536 909 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 CNN2P3-201ENST00000450201 906 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 RN7SL399P-201ENST00000471648 279 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 GCOM2-201ENST00000509133 1104 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AC097493.3-201ENST00000509725 367 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 RARRES2P5-201ENST00000564013 466 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AL136317.3-201ENST00000618497 906 ntBASIC14.31□□□□□ -0.12
EBF4Q9BQW3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
EBF4Q9BQW3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 PCDHB18P-202ENST00000526308 3197 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 TSSK5P-201ENST00000423978 907 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC140878.1-201ENST00000565277 250 ntBASIC14.3□□□□□ -0.12
EBF4Q9BQW3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.3□□□□□ -0.12
EBF4Q9BQW3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms