Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.21□□□□□ -0.61
VGLL1Q99990 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 RPL13AP25-201ENST00000484130 612 ntBASIC11.21□□□□□ -0.61
VGLL1Q99990 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.21□□□□□ -0.61
VGLL1Q99990 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 AC104794.3-201ENST00000566840 1248 ntBASIC11.21□□□□□ -0.61
VGLL1Q99990 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC11.21□□□□□ -0.61
VGLL1Q99990 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.61
VGLL1Q99990 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VGLL1Q99990 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.21□□□□□ -0.61
VGLL1Q99990 AC139530.3-201ENST00000620344 690 ntBASIC11.21□□□□□ -0.61
VGLL1Q99990 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
VGLL1Q99990 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.21□□□□□ -0.61
VGLL1Q99990 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
VGLL1Q99990 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.21□□□□□ -0.61
VGLL1Q99990 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC11.21□□□□□ -0.62
VGLL1Q99990 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VGLL1Q99990 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.21□□□□□ -0.62
VGLL1Q99990 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.21□□□□□ -0.62
VGLL1Q99990 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
VGLL1Q99990 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
VGLL1Q99990 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 MYADML-201ENST00000474610 2147 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 RHOA-206ENST00000454011 889 ntTSL 2 BASIC11.2□□□□□ -0.62
VGLL1Q99990 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC022616.1-201ENST00000518688 554 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.2□□□□□ -0.62
VGLL1Q99990 TPRX2P-201ENST00000535362 881 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC023310.3-201ENST00000557027 670 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 RPL28-205ENST00000558131 444 ntTSL 5 BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC100756.1-201ENST00000562736 682 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 AC138749.3-201ENST00000567691 622 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 SPDYE22P-201ENST00000582158 798 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.2□□□□□ -0.62
VGLL1Q99990 AC116165.1-201ENST00000611806 668 ntBASIC11.2□□□□□ -0.62
VGLL1Q99990 AC004790.1-201ENST00000612686 536 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms