Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.09□□□□□ -0.31
VRK1Q99986 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VRK1Q99986 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VRK1Q99986 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
VRK1Q99986 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.08□□□□□ -0.31
VRK1Q99986 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.08□□□□□ -0.31
VRK1Q99986 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
VRK1Q99986 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
VRK1Q99986 LRRC59-203ENST00000576448 1531 ntBASIC13.08□□□□□ -0.31
VRK1Q99986 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
VRK1Q99986 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
VRK1Q99986 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
VRK1Q99986 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
VRK1Q99986 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
VRK1Q99986 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
VRK1Q99986 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.08□□□□□ -0.32
VRK1Q99986 AC084364.1-201ENST00000551967 1556 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
VRK1Q99986 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.08□□□□□ -0.32
VRK1Q99986 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.08□□□□□ -0.32
VRK1Q99986 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 YBX1P6-201ENST00000442962 1002 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 FO681548.1-201ENST00000455617 1132 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.08□□□□□ -0.32
VRK1Q99986 GAPDHP40-201ENST00000505218 1006 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.08□□□□□ -0.32
VRK1Q99986 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.08□□□□□ -0.32
VRK1Q99986 AC010328.2-201ENST00000597698 1111 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 RHOXF1P1-202ENST00000635473 501 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.08□□□□□ -0.32
VRK1Q99986 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
VRK1Q99986 AL359881.3-201ENST00000602640 1721 ntBASIC13.08□□□□□ -0.32
VRK1Q99986 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
VRK1Q99986 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
VRK1Q99986 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.07□□□□□ -0.32
VRK1Q99986 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
VRK1Q99986 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 DGCR9-201ENST00000609630 2415 ntBASIC13.07□□□□□ -0.32
VRK1Q99986 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
VRK1Q99986 NUS1P3-201ENST00000423502 862 ntBASIC13.07□□□□□ -0.32
VRK1Q99986 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms