Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 FLJ16779-201ENST00000612722 7638 ntBASIC14.91□□□□□ -0.02
PHOX2BQ99453 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PHOX2BQ99453 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 NHP2P1-201ENST00000335274 462 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 RN7SL846P-201ENST00000467429 292 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 GDNF-207ENST00000515058 764 ntTSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC093752.3-201ENST00000567343 901 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CR392039.1-201ENST00000623217 204 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 AL158070.2-201ENST00000623713 1621 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CICP4-201ENST00000447359 2812 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 LINC02447-202ENST00000501888 2146 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 SNX18-202ENST00000343017 3140 ntBASIC14.9□□□□□ -0.02
PHOX2BQ99453 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
PHOX2BQ99453 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PHOX2BQ99453 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CCL25-202ENST00000315626 450 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SRP14-204ENST00000558720 780 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 AL157813.1-201ENST00000612996 587 ntBASIC14.89□□□□□ -0.03
PHOX2BQ99453 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.89□□□□□ -0.03
PHOX2BQ99453 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PHOX2BQ99453 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms