Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 AP005264.5-201ENST00000590066 467 ntBASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 AC215219.1-201ENST00000400706 1817 ntBASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRAMP1Q96RY5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 AL354702.1-201ENST00000442006 1960 ntBASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 FUCA1P1-201ENST00000374476 1351 ntBASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 AC006529.1-201ENST00000459978 637 ntBASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 AC091769.1-201ENST00000619576 568 ntBASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CRAMP1Q96RY5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CRAMP1Q96RY5 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 AL359091.4-201ENST00000610052 409 ntBASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 AC132872.4-202ENST00000622924 2756 ntBASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 AC019109.1-201ENST00000401725 1874 ntBASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.58■□□□□ 0.4
CRAMP1Q96RY5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CRAMP1Q96RY5 LINC00115-201ENST00000473798 1317 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms