Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 API5-211ENST00000534695 560 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC004790.1-201ENST00000612686 536 ntBASIC13.47□□□□□ -0.25
SNX18Q96RF0 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
SNX18Q96RF0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNX18Q96RF0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC114271.1-201ENST00000612689 2813 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC134915.1-201ENST00000426461 574 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC114812.1-204ENST00000449669 728 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC104596.2-201ENST00000512793 793 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC022616.1-201ENST00000518688 554 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AC008494.3-201ENST00000606615 944 ntBASIC13.46□□□□□ -0.25
SNX18Q96RF0 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.46□□□□□ -0.25
SNX18Q96RF0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNX18Q96RF0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNX18Q96RF0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SNX18Q96RF0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms