Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 AC114271.1-201ENST00000612689 2813 ntBASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 CLUHP2-201ENST00000426660 1303 ntBASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 NUS1P3-201ENST00000423502 862 ntBASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 GIMAP3P-201ENST00000495150 836 ntBASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 AL391280.1-201ENST00000506969 1062 ntBASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC17.03■□□□□ 0.32
CHAMP1Q96JM3 KHSRPP1-201ENST00000427983 1768 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 LRRC59-203ENST00000576448 1531 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 CETP-203ENST00000566128 1733 ntTSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 AL118506.1-201ENST00000601296 3082 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 AC073548.1-201ENST00000624088 1882 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 AP005018.1-201ENST00000525475 301 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 AC092552.1-201ENST00000547243 906 ntBASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHAMP1Q96JM3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CHAMP1Q96JM3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 AC139712.1-201ENST00000378256 1875 ntBASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHAMP1Q96JM3 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms