Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AC005740.2-201ENST00000511085 419 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AL021578.1-201ENST00000613646 709 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 CU633904.3-201ENST00000624042 1029 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 KRT8P4-201ENST00000509735 1454 ntBASIC13.92□□□□□ -0.18
TM9SF4Q92544 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.92□□□□□ -0.18
TM9SF4Q92544 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TM9SF4Q92544 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AL137784.3-201ENST00000623858 2288 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 POM121L8P-201ENST00000417732 1281 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 EIF3FP3-201ENST00000434851 1086 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC011742.3-201ENST00000439053 820 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 POM121L9P-203ENST00000441984 1285 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 RNA5SP423-201ENST00000517127 109 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AL451050.2-201ENST00000606967 682 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC015967.2-201ENST00000624092 234 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC006435.4-201ENST00000625037 234 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 AL356737.1-201ENST00000634391 234 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 AC055811.4-201ENST00000624039 1754 ntBASIC13.91□□□□□ -0.18
TM9SF4Q92544 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.91□□□□□ -0.18
TM9SF4Q92544 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TM9SF4Q92544 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms