Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 MIR193BHG-211ENST00000641433 5365 ntBASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAF3IP1Q8TDR0 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 INE2-201ENST00000630399 1874 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 TTTY23B-201ENST00000442790 549 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 BCRP2-202ENST00000447763 634 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 BCRP6-201ENST00000510112 632 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 BCRP7-201ENST00000511549 544 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AC025279.2-201ENST00000569730 653 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ECM1P1-201ENST00000604092 1279 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AL022328.1-201ENST00000610050 478 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AC132938.4-201ENST00000623835 848 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AL358472.5-202ENST00000641448 1267 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 AC136759.1-202ENST00000530858 2194 ntBASIC15.34■□□□□ 0.05
TRAF3IP1Q8TDR0 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAF3IP1Q8TDR0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 INE1-201ENST00000456273 945 ntBASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC25A47P1-201ENST00000531577 414 ntBASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAF3IP1Q8TDR0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms