Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 DPM3-202ENST00000368399 517 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AC092658.1-201ENST00000505836 891 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AC003686.1-201ENST00000550956 1034 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 RN7SL219P-201ENST00000582872 296 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AC008805.1-201ENST00000590892 364 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MIR6869-201ENST00000619434 62 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 AC068587.8-201ENST00000641239 219 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 HSPA8P5-201ENST00000456928 2069 ntBASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ZIC4Q8N9L1 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 MYO15B-237ENST00000642007 4893 ntBASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 SERPINA13P-202ENST00000478994 924 ntBASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 RN7SL163P-201ENST00000583100 276 ntBASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AL118558.3-201ENST00000607414 1079 ntBASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AC133540.1-201ENST00000620845 1019 ntBASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ZIC4Q8N9L1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms