Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AP000593.2-201ENST00000542775 1433 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC106820.3-201ENST00000561653 397 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 AC015936.2-201ENST00000593177 259 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 MIR6074-201ENST00000612054 107 ntBASIC15.3■□□□□ 0.04
RFX6Q8HWS3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.3■□□□□ 0.04
RFX6Q8HWS3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AC020910.6-201ENST00000623084 1459 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AC092933.1-201ENST00000393644 945 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TTTY23B-201ENST00000442790 549 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 AC008735.3-201ENST00000596646 500 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 OR10B1P-201ENST00000601666 907 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 BX088702.1-201ENST00000610784 235 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
RFX6Q8HWS3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RFX6Q8HWS3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 PEG13-201ENST00000631594 5667 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 AL031595.1-201ENST00000623969 4709 ntBASIC15.28■□□□□ 0.04
RFX6Q8HWS3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RFX6Q8HWS3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms