Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 RN7SL67P-201ENST00000492147 296 ntBASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PHBP15-201ENST00000574228 665 ntBASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 AL022334.2-201ENST00000610000 484 ntBASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
UBE3BQ7Z3V4 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE3BQ7Z3V4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
UBE3BQ7Z3V4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
UBE3BQ7Z3V4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC18.14■□□□□ 0.5
UBE3BQ7Z3V4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 MBP-201ENST00000354542 575 ntTSL 2 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 HINT2P1-201ENST00000419438 481 ntBASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 RPL8P2-201ENST00000430538 502 ntBASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 AC026320.2-201ENST00000434379 478 ntBASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 RN7SL258P-201ENST00000478664 300 ntBASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBE3BQ7Z3V4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 AC008723.1-201ENST00000506922 207 ntBASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 AC005586.2-201ENST00000563946 837 ntBASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 LINC01783-202ENST00000614408 828 ntBASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 BX284668.2-205ENST00000619677 828 ntBASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE3BQ7Z3V4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms