Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
LYSMD3Q7Z3D4 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 BRWD1P1-201ENST00000401091 371 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 ACTBP11-201ENST00000436287 1126 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 RPSAP36-202ENST00000494591 1261 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 AC008825.2-201ENST00000603374 718 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 CICP20-201ENST00000443330 2801 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 OR2I1P-209ENST00000641730 5365 ntBASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD3Q7Z3D4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 MIR1908-201ENST00000410394 80 ntBASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 GOLGA2P4-201ENST00000441462 777 ntBASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 MIR4783-201ENST00000580343 82 ntBASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 RN7SL219P-201ENST00000582872 296 ntBASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.76□□□□□ -0.05
LYSMD3Q7Z3D4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 MYADML-201ENST00000474610 2147 ntBASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LYSMD3Q7Z3D4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms