Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.34□□□□□ -0.43
HIST2H2BCQ6DN03 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST2H2BCQ6DN03 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HIST2H2BCQ6DN03 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST2H2BCQ6DN03 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HIST2H2BCQ6DN03 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.33□□□□□ -0.43
HIST2H2BCQ6DN03 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 MIR611-201ENST00000384869 67 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 RPL5P21-201ENST00000404620 815 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 HNRNPA1P25-201ENST00000422644 937 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 OR2A1-AS1-203ENST00000468575 568 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 MIEF1-215ENST00000637854 213 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AC138761.6-201ENST00000583997 1423 ntBASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.33□□□□□ -0.44
HIST2H2BCQ6DN03 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 KRT8P28-201ENST00000433288 1390 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 LILRP1-201ENST00000444199 1370 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 CFL1P6-201ENST00000400899 494 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 RN7SL128P-201ENST00000467883 305 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.32□□□□□ -0.44
HIST2H2BCQ6DN03 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms